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(BBC) Cool Geneticists jailbreak apple DNA   (bbc.co.uk) divider line 55
More: Cool, DNA, genetic code, geneticists, competitive advantages, Mail Online, nurtures, Nature Genetics, climatologies  
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3761 clicks; posted to Geek » on 30 Aug 2010 at 9:15 AM   |  Favorite    |   share:  Share on Twitter share via Email Share on Facebook   more»   |    Get this fabulous T-Shirt and impress the methane out of your friends! shirt it!



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2010-08-30 09:16:38 AM
Couldn't they have analyzed an edible one, such as a Rome or a Fuji?

.
 
2010-08-30 09:17:48 AM
DistendedPendulusFrenulum: Couldn't they have analyzed an edible one, such as a Rome or a Fuji?

.


The squishier ones are easier to crack.
 
2010-08-30 09:26:07 AM
FTA: "The researchers also discovered that the huge size of the apple genome originated when it got accidentally duplicated far back in its evolutionary history."

Uh, what? Careless science journalist, I suspect that there is something interesting behind that statement. Care to explain WTF it is?

And I concur with DPF above. "Golden Delicious" is tres oxymoronic.
 
2010-08-30 09:31:06 AM
my beekeeping journal sent me this this morning. why are we farking with our food.
 
2010-08-30 09:34:13 AM
asciibaron: my beekeeping journal sent me this this morning. why are we farking with our food.

Because if we do not, we would not be able to produce enough food to keep us fed.
 
2010-08-30 09:37:19 AM
DistendedPendulusFrenulum: Couldn't they have analyzed an edible one, such as a Rome or a Fuji?
Granny Smith?
.


FTFY.

A Golden Delicious is neither.
 
2010-08-30 09:43:36 AM
asciibaron: my beekeeping journal sent me this this morning. why are we farking with our food.

I fail to see how sequencing the DNA is "farking with our food". Unless you eat that particular apple, I guess.
 
2010-08-30 09:52:47 AM
TheRaven7: DistendedPendulusFrenulum: Couldn't they have analyzed an edible one, such as a Rome or a Fuji?

.

The squishier ones are easier to crack.


Gaaaaarrrrrrr nothing worse than a mealy apple

.
 
2010-08-30 09:54:24 AM
Seems like a lot of effort for a niche-market fruit. Why would you start out on a variety that has a complex polyploid genome, and tastes like moldy cardboard?
 
2010-08-30 09:55:54 AM
What took them so long was they kept finding "one more thing" in the data.
 
2010-08-30 09:56:11 AM
doglover: DistendedPendulusFrenulum: Couldn't they have analyzed an edible one, such as a Rome or a Fuji?
Granny Smith?
.

FTFY.

A Golden Delicious is neither.


They have an apple in Minnesota--honeysomething--that's nearly as good a cooking apple as a Granny Smith

.
 
2010-08-30 09:57:22 AM
DistendedPendulusFrenulum: doglover: DistendedPendulusFrenulum: Couldn't they have analyzed an edible one, such as a Rome or a Fuji?
Granny Smith?
.

FTFY.

A Golden Delicious is neither.

They have an apple in Minnesota--honeysomething--that's nearly as good a cooking apple as a Granny Smith

.


GRANNY SMITHS ARE NOT COOKING APPLES!!

Apples are sour fruit. If it's sweet or soft, it's not an apply anymore, it's cider fodder.
 
2010-08-30 09:59:57 AM
Cue C&D order from Steve Jobs in 3.... 2.... 1....
 
2010-08-30 10:03:08 AM
doglover: Apples are sour fruit. If it's sweet or soft, it's not an apply anymore, it's cider fodder.

Fuji apples would beg to differ.
 
2010-08-30 10:05:33 AM
asciibaron: my beekeeping journal sent me this this morning. why are we farking with our food.

BEEEEEEEEEEEES?

.
 
2010-08-30 10:05:46 AM
Look at it this way. Start with 'meh' apple, then start tweaking its genes until it tastes 'woah', and then you set the bar higher for the other apple geneticists.

/would prefer a banana
 
2010-08-30 10:06:55 AM
doglover: D[..]

GRANNY SMITHS ARE NOT COOKING APPLES!!

[...].


Heretic

.
 
2010-08-30 10:07:58 AM
doglover:

Hey if you are in Japan, perhaps you get those enormous apples from Liaoning in China in the Fall. . .

.
 
2010-08-30 10:08:08 AM
At least they didn't do anything to the tomatoes...
 
2010-08-30 10:08:08 AM
Scientists from 20 institutions took two years to unravel the code - the largest plant genome uncovered to date...

The researchers also discovered that the huge size of the apple genome originated when it got accidentally duplicated far back in its evolutionary history.


Built with absolute ignorance. Decoded by 86 scientists over 2 years. Maybe they were really dumb scientists.
 
2010-08-30 10:15:16 AM
Bevets: Scientists from 20 institutions took two years to unravel the code - the largest plant genome uncovered to date...

The researchers also discovered that the huge size of the apple genome originated when it got accidentally duplicated far back in its evolutionary history.

Built with absolute ignorance. Decoded by 86 scientists over 2 years. Maybe they were really dumb scientists.


Do what, now?
 
2010-08-30 10:21:00 AM
doglover: GRANNY SMITHS ARE NOT COOKING APPLES!!


Then what is she cooking?
 
2010-08-30 10:29:12 AM
jso2897:

Do what, now?


Oh, go read it. It's an unrelieved block of text comprised of out-of-context quotes that are so arcane there's no way possible to make it all add up to the same thing.

Kind of like the Bible

.
 
2010-08-30 10:31:40 AM
Scientists from 20 institutions took two years to unravel the code - the largest plant genome uncovered to date.

Take that, stupid rice (new window)
 
2010-08-30 10:42:33 AM
RatOmeter: Uh, what? Careless science journalist, I suspect that there is something interesting behind that statement. Care to explain WTF it is?

Probably an instance (or multiple instances) of polyploidy.

If you have two (or four) copies of the basic coding instructions, you can mutate one copy into insensibility (and thus, eventually into new meanings) without losing the basic function (since there's still another copy). Thus, more variation within the species genome.
 
2010-08-30 10:43:06 AM
jso2897: Bevets: Scientists from 20 institutions took two years to unravel the code - the largest plant genome uncovered to date...

The researchers also discovered that the huge size of the apple genome originated when it got accidentally duplicated far back in its evolutionary history.

Built with absolute ignorance. Decoded by 86 scientists over 2 years. Maybe they were really dumb scientists.

Do what, now?


Basically Bevets believes that any time science discovers something, the fact that it took an intelligent person some time to decipher it means that God intelligently designed it.

That's the new way of making Christianity keep making sense for this day and age - science just proves god, since once we know HOW it works, it means... God... designed it?
 
2010-08-30 11:28:11 AM
doglover: GRANNY SMITHS ARE NOT COOKING APPLES!!

this man has never had a pie made with granny smiths.
slightly sour, apples still sorta crisp, awesome.

/miss apple pie :(
//damn this diabeetis
///type 1, not a fatass.
 
2010-08-30 11:38:12 AM
So they study Genets?
i52.photobucket.com
 
2010-08-30 11:47:09 AM
Scientists from 20 institutions took two years to unravel the code - the largest plant genome uncovered to date...

The researchers also discovered that the huge size of the apple genome originated when it got accidentally duplicated far back in its evolutionary history.


Bevets:

Built with absolute ignorance. Decoded by 86 scientists over 2 years. Maybe they were really dumb scientists.


LasersHurt:

Basically Bevets believes that any time science discovers something, the fact that it took an intelligent person some time to decipher it means that God intelligently designed it.

Clearly, we all know that intelligent agents can create specified information and that information comes from minds. A computer user who traces the information on a screen back to its source invariably comes to a mind, that of a software engineer of programmer. The information in a book or a newspaper column or an ancient inscription ultimately derives from a writer or scribe -- from a mental, rather than a strictly material cause. The case for the causal adequacy of intelligent design should be obvious from our ordinary experience...

Indeed, unlike an argument form ignorance, an inference to the best explanation does not assert the adequacy of one causal explanation merely on the basis of the inadequacy of some other causal explanation. Instead, it asserts the superior explanatory power of a proposed cause based upon its proven -- its known causal adequacy and based upon a lack of demonstrated efficacy among the competing proposed causes... The inference to design, therefore, depends on present knowledge of the demonstrated causal powers of material entities and processes (inadequate) and intelligence (adequate). ~ Stephen Meyer

Certainly, my own research with antibiotics during World War II received no guidance from insights provided by Darwinian evolution. Nor did Alexander Fleming's discovery of bacterial inhibition by penicillin. I recently asked more than 70 eminent researchers if they would have done their work differently if they had thought Darwin's theory was wrong. The responses were all the same: No.

I also examined the outstanding biodiscoveries of the past century: the discovery of the double helix; the characterization of the ribosome; the mapping of genomes; research on medications and drug reactions; improvements in food production and sanitation; the development of new surgeries; and others. I even queried biologists working in areas where one would expect the Darwinian paradigm to have most benefited research, such as the emergence of resistance to antibiotics and pesticides. Here, as elsewhere, I found that Darwin's theory had provided no discernible guidance, but was brought in, after the breakthroughs, as an interesting narrative gloss. ~ Philip Skell

Rules of atheism "Science":

Rule #1 God is IRRELEVANT
Rule #2 If God is relevant, see Rule #1
Rule #3 If God might be relevant, see Rule #1

Theists will consider natural causes.
Atheists will ONLY consider natural causes.
 
2010-08-30 11:49:36 AM
Bevets: Rule #1 God is IRRELEVANT

Finally, you're coming around.
 
2010-08-30 11:53:23 AM
DistendedPendulusFrenulum: They have an apple in Minnesota--honeysomething--that's nearly as good a cooking apple as a Granny Smith

.


Honeycrisp. They're great both for cooking and eating out of hand, but where they really shine is cider. They also keep much longer than most apples without refrigeration; in the fridge they seem to last forever.
 
2010-08-30 11:55:27 AM
Ouch, that was a messy link. I meant to point to the wiki article: Honeycrisp.
 
2010-08-30 11:57:33 AM
Where is your God now?

images.ientrymail.com
 
2010-08-30 12:03:20 PM
Bevets: Theists will consider natural causes.
Atheists will ONLY consider natural causes.


That's an incredibly silly argument, haha. First, theists will consider natural causes insomuch as they attribute all creation, including natural causes to God. Ergo, it doesn't matter what they see, learn, feel, or do, it's all God. So of course they're willing to "consider" natural causes, because the root of that is still God.

And of course Atheists don't consider theist arguments. That's the definition of Atheists!

What a vapid tautological statement.
 
2010-08-30 12:44:54 PM
RatOmeter: FTA: "The researchers also discovered that the huge size of the apple genome originated when it got accidentally duplicated far back in its evolutionary history."

Uh, what? Careless science journalist, I suspect that there is something interesting behind that statement. Care to explain WTF it is?

And I concur with DPF above. "Golden Delicious" is tres oxymoronic.



My guess would be that they were referring to Gene Duplication.
Not sure why it's worth mentioning. It would be more noteworthy if the apple had a massive genome that wasn't the result of gene duplication.
 
2010-08-30 12:47:07 PM
Bevets: Scientists from 20 institutions took two years to unravel the code - the largest plant genome uncovered to date...

The researchers also discovered that the huge size of the apple genome originated when it got accidentally duplicated far back in its evolutionary history.

Built with absolute ignorance. Decoded by 86 scientists over 2 years. Maybe they were really dumb scientists.


or it could be that apples have almost twice as many chromosomes as humans, meaning there are about six billion base pairs in its genome. i thought learning was a bad word to creationists. do you have to say 10 hail marys every time you learn something? is that how it works? i hope whenever you get sick you pray god heals you instead of taking advantage of the scientific method heathens like me used to produce medicines to keep your idiot ass alive. it would really help out my health care. thanks!
 
2010-08-30 01:04:58 PM
Why do you dumbasses respond to trolls? WHY? WHY? WHY?
 
2010-08-30 01:06:17 PM
TheRaven7: Why do you dumbasses respond to trolls? WHY? WHY? WHY?

Let's be fair, Bevets isn't a troll. He is what he is, but he's not a troll.
 
2010-08-30 01:10:03 PM
LasersHurt: TheRaven7: Why do you dumbasses respond to trolls? WHY? WHY? WHY?

Let's be fair, Bevets isn't a troll. He is what he is, but he's not a troll.


It's possible to put him on the defensive to the extent he actually writes something of his own.

But it will be brief


.
 
2010-08-30 01:13:11 PM
Still no cure for cheeto-stained fingers of Apple fanboys.
 
2010-08-30 02:14:23 PM
DigitalBurnOut: Still no cure for cheeto-stained fingers of Apple fanboys.

I thought Apple Fanboys were hipsters? Cheeto-stained seems like an adjective more reserved for "Fandroids" or whatever they're called now.

/you're still a farking douche for using "Apple Fanboys"
 
2010-08-30 02:19:53 PM
TheRaven7: Why do you dumbasses respond to trolls? WHY? WHY? WHY?

because it amuses me when people defend religion based on any other argument other than faith. i can understand you WANT to believe in something. but when you try to prove that something exists when it doesn't..well i just personally find that quite entertaining.
 
2010-08-30 03:01:26 PM
genzoman: because it amuses me when people defend religion based on any other argument other than faith. i can understand you WANT to believe in something. but when you try to prove that something exists when it doesn't there is no evidence it does..well i just personally find that quite entertaining.

Somewhat ironically, B's quote about irrelevance is more accurate than your own here. Saying something DOESN'T exist due to lack of evidence is just as much a position of faith as saying it DOES when there is no evidence. A lack of evidence for something does not necessarily mean something does not exists; it just means it can be discounted.

BTW, in anticipation of this response by B and potentially others, by "evidence" I mean independent verifiable, scientific evidence. Anything in the Bible in this context doesn't count.
 
2010-08-30 03:51:49 PM
Bevets:

Rules of atheism
"Science":

Rule #1 God is IRRELEVANT
Rule #2 If God is relevant, see Rule #1
Rule #3 If God might be relevant, see Rule #1

Theists will consider natural causes.
Atheists will ONLY consider natural causes.


Firefly4F4:

Saying something DOESN'T exist due to lack of evidence is just as much a position of faith as saying it DOES when there is no evidence. A lack of evidence for something does not necessarily mean something does not exists; it just means it can be discounted.

The Circle of Atheism:
It is not possible to have evidence for someone who does not exist, therefore your evidence does not exist. (See Rule #1)
 
2010-08-30 03:59:57 PM
Bevets: The Circle of Atheism:
It is not possible to have evidence for someone who does not exist, therefore your evidence does not exist. (See Rule #1)


Bevets knows how to trick people into Christianity with his logical loops, watch out or he'll OH NO I BELIEVE IN JESUS NOW
 
2010-08-30 07:11:01 PM
Bevets: Scientists from 20 institutions took two years to unravel the code - the largest plant genome uncovered to date...

The researchers also discovered that the huge size of the apple genome originated when it got accidentally duplicated far back in its evolutionary history.

Bevets:

Built with absolute ignorance. Decoded by 86 scientists over 2 years. Maybe they were really dumb scientists.


LasersHurt:

Basically Bevets believes that any time science discovers something, the fact that it took an intelligent person some time to decipher it means that God intelligently designed it.

Clearly, we all know that intelligent agents can create specified information and that information comes from minds. A computer user who traces the information on a screen back to its source invariably comes to a mind, that of a software engineer of programmer. The information in a book or a newspaper column or an ancient inscription ultimately derives from a writer or scribe -- from a mental, rather than a strictly material cause. The case for the causal adequacy of intelligent design should be obvious from our ordinary experience...

Indeed, unlike an argument form ignorance, an inference to the best explanation does not assert the adequacy of one causal explanation merely on the basis of the inadequacy of some other causal explanation. Instead, it asserts the superior explanatory power of a proposed cause based upon its proven -- its known causal adequacy and based upon a lack of demonstrated efficacy among the competing proposed causes... The inference to design, therefore, depends on present knowledge of the demonstrated causal powers of material entities and processes (inadequate) and intelligence (adequate). ~ Stephen Meyer

Certainly, my own research with antibiotics during World War II received no guidance from insights provided by Darwinian evolution. Nor did Alexander Fleming's discovery of bacterial inhibition by penicillin. I recently asked more than 70 eminent researchers if they would have done their work differently if they had thought Darwin's theory was wrong. The responses were all the same: No.

I also examined the outstanding biodiscoveries of the past century: the discovery of the double helix; the characterization of the ribosome; the mapping of genomes; research on medications and drug reactions; improvements in food production and sanitation; the development of new surgeries; and others. I even queried biologists working in areas where one would expect the Darwinian paradigm to have most benefited research, such as the emergence of resistance to antibiotics and pesticides. Here, as elsewhere, I found that Darwin's theory had provided no discernible guidance, but was brought in, after the breakthroughs, as an interesting narrative gloss. ~ Philip Skell

Rules of atheism "Science":

Rule #1 God is IRRELEVANT
Rule #2 If God is relevant, see Rule #1
Rule #3 If God might be relevant, see Rule #1

Theists will consider natural causes.
Atheists will ONLY consider natural causes.


Darwin was just the first to make the observation that life changed (at least the first to do so on paper). Without the works of Gregor Mendel, Darwin's observations were simply observations. You have heard of Mendel haven't you? You and your little quote mines can attack the authority of Darwin until the end of time, but these attacks are as futile as they are childish. The modern theory of evolution and Darwin's theory are very much different.

As for atheists only considering natural causes perhaps you should read The Dragon In My Garage. When your god has a relevance to my life, I will believe in it. Until then, Why should I?
 
2010-08-30 07:35:24 PM
fireandashes36: Until then, Why should I?

Because you'll burn in Hell for eternity?

No seriously, why did you guys have to ruin a possibly fun thread with farking religious flamewar? How can the same shiat over and over again be amusing to anyone?
 
2010-08-30 08:28:40 PM
ProtoMeTheUs: RatOmeter: FTA: "The researchers also discovered that the huge size of the apple genome originated when it got accidentally duplicated far back in its evolutionary history."

Uh, what? Careless science journalist, I suspect that there is something interesting behind that statement. Care to explain WTF it is?

And I concur with DPF above. "Golden Delicious" is tres oxymoronic.


My guess would be that they were referring to Gene Duplication.
Not sure why it's worth mentioning. It would be more noteworthy if the apple had a massive genome that wasn't the result of gene duplication.


It's probably whole genome duplication, which isn't unusual in plants. And, it's also probably huge because of the large numbers of transposable elements in plants.

What is driving me up the wall is that the article equivocates the "genetic code" with "sequencing the genome" when they are two COMPLETELY different things. The genetic code is what combination of nucleotides recruit tRNAs to make amino acids. That was cracked long ago and is the same across virtually all organisms.

Sequencing the genome is unique to each species. That's a BFD, is really hard to do, and is really informative.
 
2010-08-30 08:53:42 PM
Bevets never responds to me. I think he doesn't believe I exist.
 
2010-08-30 10:00:49 PM
Bevets: Rules of atheism "Science":
Rule #1 God
The unfathomable is IRRELEVANT
Rule #2 If God
The unfathomable is relevant, see Rule #1
Rule #3 If God
The unfathomable might be relevant, see Rule #1

FTFY.

Bevets: Theists will consider natural causes
...but always dismiss them, since...
Bevets: There can be no higher source for Truth than the Word of God.


/been a while since I've needed this bit off the clipboard
 
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